MK006639 K4083

Resource Type: 
Genetic Marker
Name: 
MK006639 K4083
Identifier: 
MK006639_K4083
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006639 K4083, is adjacent to primer, K4083_X.
The genetic_marker, MK006639 K4083, is adjacent to primer, K4083_Y.
The genetic_marker, MK006639 K4083, is adjacent to primer, K4083_Common.
The genetic_marker, MK006639 K4083, is located in gene, DCAR_019384.
The genetic_marker, MK006639 K4083, is located in gene, LOC108222808.
The marker_locus, K4083, is an instance of genetic_marker, MK006639 K4083.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr544.352K4083MapViewer
2016 70796 NG full mapChr56.66K4083MapViewer
2016 Integ NG full mapCH559.436K4083MapViewer
2016 70796 NG bin mapChr56.66K4083MapViewer
2016 Integ NG bin mapCH558.895K4083MapViewer
Synonyms: 
  • MK006639
Sequence Coordinates: 
DCARv2_Chr5:38626716..38626770-
View location in JBrowse: 
DCARv2_Chr5:38626716..38626770-
Sequence: 
TCTGTTTCAAATATCCCTATGGAACTCCAGTTATTATYATCATAAGTATA
TGCTTCCCAGTTCCCATTTGG
Sequences: 
>MK006639_K4083 ID=MK006639_K4083; Name=MK006639 K4083; organism=Daucus carota; type=genetic_marker
TCTGTTTCAAATATCCCTATGGAACTCCAGTTATTATYATCATAAGTATA
TGCTTCCCAGTTCCCATTTGG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCTGTTTCAAATATCCCTATGGAACTCCAGTTATTAT
Three Prime Flanking Region: 
ATCATAAGTATATGCTTCCCAGTTCCCATTTGG
SNP: 
C/T