Resource Type:
Gene
Organism:
Name:
LOC108222828
Identifier:
LOC108222828
Cross Reference:
| NCBI Gene |  |
|---|
Relationship:
| Relationships |
|---|
| The mRNA, XM_017396754.1, is a part of gene, LOC108222828. |
| The genetic_marker, MK006643 K4087, is located in gene, LOC108222828. |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. |
Transcripts:
| Transcript Name | Identifier | Type | Location |
|---|---|---|---|
| XM_017396754.1 | XM_017396754.1 | mRNA | DCARv2_Chr5:31214583..31231263 |
Sequence:
CCCAATGAAATACCCGAAAAAGGCCTCGTTCTTCGTCTTCGTCTCTGCAT
GTCCAGCCCACTACTAGTTACAATCCTAGAGAGAGAAACAACAAAACTTT
TAGAGAGAGAAAGTTTGTGAACGAGCACGAAGACGAACAACATTATATAC
ACTTCATCTACACAAAATTACACACAAATTTATATTTGTATGATTATTTG
TATGTTATATTGATAGGGCGCGAAGGAGTTTATTTAAAGGTTGATGTTAA
TTAGGGCTAATTTGTTGTTTTAATTGGGGCAAAACCCTAGAAATATATAC
GGGGATTAAGCTGCGATTTTCTCGACGTATTGTCACAATTGAGGTAATTT
TCGTGTGAATTTTGTAGTTTTGCAAACCCTAGAACGTGGAATTGGTGCGT
TTAGGGTTAGTATAAGCAGCATTTACTGAAATTCTCTATTTCTTTATTTG
TATGGTTCATTGCGTGGCATTTGATTCTAGTGTTAATACTTATCGCGTAG
CGTGTTATTGTGCTCTGTCGACGTATAGAAGTTAGTTGCGCTATCATTTT
AATTGAACAACCTGTGAATAGTTTGTATGTGATCATGTTGTGTATTTTAG
CAAAACCTTGAAATCTCAACGTTCTCAATGTAATGTATATATGTGTGTTT
TTGTGAGGGCTAAGTTCGCCTTTTTGACCGTTTAAATATAATATGCGTGA
TTTTCTGAGCTGTCTCAGTCTGTTGCACTATCTATTTGTTGGTACTTTTC
TCGATTCTTCTTCAATAATTGCTAGTACTTTGTTATAGGAACCACATTAA
GGTTAAAAAGATGGGACCAGAATTCTCTTAAGAGTTGTGAGGAATGCATG
AATGTAGTCCAGAACTTCCTGTTTCTGTCAATGCTTGTATAGATTCTATG
GGAGTTGTTGTAAACCACAAAGGTGGTGTTAGTAATGACCTTTCTTCAAA
TCAAACAGACATCGAGGAGACAAAAGTAGAACTAAGGTATTGTGGCATTT
TACTTCTGTTATCAAGTGAAATATGCTAGTTAGTTATTATACATGGAAAC
AATGATTTATAAAGTAGCTGTTGTTACTCTTAACAGTCAGCATTATGTTT
GTTACGAGCAAGCAAGAAGACAGTTGGAGTTTCTTGAGCAAGTAAGCATT
AGAGATTAGCTTAGCGCTAGAATCTTTTAACAAGTATTGGATTGCTGTGA
GTAACATTATCTTTTTGCAGGGTGGTGATCCTCTGGACTTTAGAACTGGG
ACTGAGAATGCCGCTTCACTTAGTGTTCAGTCTACTTCCTTGACAGATCA
ACATCCTGAGCAGTTTGTGATCAGGTATTTCTTTTAAGGGTTAAGTGTCA
ATGTGCTCACTTAAGTCACACCTAAATATTACTCTCGTCAATTATGTAAA
CAGGGGATCATCTAAATAAATTACGTGAGCACATATATATATATATATGT
CTTTTGGTTTAATCTAAAATTTTATGATGGAAGATGTTAACACCTGTCAA
GTAAACTGATACGCCGACATAGCAGACAAACAAGCTTAAAAAAAATATAA
ATCTGAAATACAATGTGTGTACACTTATACATATTTGTGTGTAATACTCA
GTCTGATTTCTTCCTCTTTTTGTTCGATCTTCTCATTTCTCTTATCAATT
TCTGAAATCATTATTGGCCAATTTTCAAATTTGAATTAAACTCTTTACAA
TTATATTTAATATTTAGTGAAAGTATTTGGAACCATGTCCCATTTCCTCT
TACTTATGCGTTTCCAATCGAACTATGACCCCATCTCGATTAATTTCGCA
TTGATCACGGCAGGCATTTCCATCCATTATCTATAGAGTGAGGGGGCAGC
TTGCGGAGCTTTCACTCCCACTTAAAAGGAGAAAGAGATTTTCAAATAAA
ATCAATTACCTGAACAAACACAATAAAGTATATGTATTATCTTAATTAAC
ACCATTTATGTTACAATTGTACACGTTAATAGTGGGAAGTCTAACTAAAT
TTGAAGATAGGTGGTGTTGTGAAGATCTGACCTAGCTTGGTTAGGGTTTG
ATGATTGGATTCAAAACTATTAGATCAAGTATAGTCTTATCTGTATTACT
ATCAACACATGGAATTTGAGTTATTATTATATATTTGTGGTGGTGATAAT
AGGGTATAGATACAGATAGACATATACTTTATGTTTGACATGACAGAAGA
AGTAGTCTTAGTATTTTTCATTTTTCTTCTTCTTTCAAGTCCATCAGATG
CTACATCAGCACCTGATGAGTTTATTTGCCATGTATTAAAGGTTCCTGTT
TATAAACTTTTGACTTGACAGGGTGACTTAAATACGAGTTCAAATGATTT
AAATGATACTGTCTCCATCCCATTTCTTTCTTAACACTTTCTATGTTGGA
ATGTTCCAATCATATCTTAACATATTTAAAATATCATACTATACCTTACC
ATTATCATATTATCTTTGTTCCCAATTTCTTAAGGCAGAACATGATAAAA
AAATGATACCACTGCTTTGGTTTATTCAATAGCTTTGCATGAGCTGATCG
TGGGTTATTATATTATTTTAGAGGATATATTTAATTTTCAAGTCCACAGT
TACTTTTGTTTGTCATTTCGCTAATCTGTTGCAAGGTTATATTGGTGAAA
GTATTTTTTCTAGATTTGGCATATCACCAAAAATTTTCTTATAAATTTTT
GCCATGTAAATTAAGAGGCTTCAATAATATCATAATAAAACTTATCTGTT
GTAGCATGTATCCCTTGCTTGTGTGTGATGATTACTACACGTTGATGCAT
ATAGTATAAATATGCTGTTATTGCAGTGAAACAAAAGGTAGTTTTGCATT
GGCTGCTTCACCTCCAGGGGATTCTGACGAAAGTAGTGGTAGACCTAGAG
CTCCTTCGGTGAATGACCCTAATAGTGCTGATAATCTTATGCTATTTATC
AAGGAGAATGGTATTCCCAAAGGTGAAAGAAGTTTGTTACGATCCAGTCG
GGGTACTGTTGGTCCTTTTGAACAGTCTTCACAGTTGGTCGGAGGTCAAC
ATGCCAAAGAATCAGATGAGTCTACTGCATTTGGGCTCCCAAAGAAAGCG
TATGAGCGAAGGAACAGATCACGTCCAAACCGTGTTGTAGTTCGATCAAA
TTCTACAGATGTTATGTCATCTTCAAGCGCTCGTACTGCTTTATCTTCTC
TTCATGTGCCTAAGGTGGTAAAAGGGACAGTTGATGCGGACAACCAGAAG
GACCATATGATTTCTTCAAATTCAAATATGAATCCAACAAGTCCAAATTG
TATCATTATTCCCAAGGAAGAACCGTATAAGCTCCAGATAGATATGGAAT
TGGATGGGGGAAATGCTGCAGAATCAACTGTTGCCCAGCCCAATGTAGGT
CTTACTAATGCCCAGATAGATCGTAGTGCTTCAGAAAATATGCAAGACAG
CCGACACAATCAAATTATGGAATTTGAGTTTCAGAGAACTCAGAATGAAA
CGGTTCTCTCAAAACCTGAATCTCAAGCGGGAAGTGAACAGATCTCTGTA
GGTCAGGAATGTGACCCATCTCTTAATATAGCTAATAATGAAGTTCAAGA
CACTTGTAGTCTAATCAATAGGTTTGGTGGGAGTATAGGTGATGGAAAAG
ATCCATTAAATGAAATCGGTAATAAGAATGGAGTACTTGAGGCGAAGGGT
TCAGATTTGGAAACATCTGGCTCCAAAGCTGGTCTTCAGGTAAATGGAAT
TGTAGATAATGAAATTCTTACCAACTTAAAAAGTATTGGCTCAAATGGAT
GTACTAAAGAAGATGCTTTAGAATCTGGGGAGCCAACAAACATGGAAAGT
ACCAAGTCAGCTGAGGATAACAATGTTACCAAAGTTGACAATATATGTGA
TGCTGCCAATGTCAACAACAGTTCCTGTCACAGCCAAGAAATTGGTTCCT
TGTTAAGAGACGAGGAAGCCTTAAATGAAAAAGTATCTAATTCAGAAAGT
AAGGCTAAAAATCTCATGGTCATTGAGGGGAATGAACAAGTAGAAACTTC
TTTTTTAGAGAACGAGAGAATGCCCGGCAATGTTATAGATTCTAATCACC
TCAATGGAAACAAAGATACTCATACTGGTAGACTTCATTGTTCCATAGAT
ACATGTGTTCCAGAGACTCCAGATGCTATGTTTCCTCCTAGAGATTCCTC
TATTTCCCTAGAGCAACAAACTTGTTCTCAGGACTTGAAATTGGAAACGA
AGGCGCGTGAAGATTCTATTTTGGAAGAAGCTCGTGTTATAGAGGTTACA
ACATTGGCCTTGTTACATTTTCTATACTTTCTCTTCGTGTTGACTAAAAT
ATTTTTGGTTCTGTAATCAGGCTAAACGTAAGAGAATTGCAGAGTTATCT
GTTTATACATTATGTGTGGAGAGTCGCCGAAAATCTCATTGGGATTTTGT
CCTTGAGGAGATGGCATGGTTGGCAAATGATTTTGCACAGGTATGACGCA
ACTTTAAAGCATTTCTTGTTTGTATCTTTTTTTTTTTTTTTTTTTTTTTT
AAAATTTTAAAATCCCAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTATTTAACATATTG
AAATGCCACAATGGTGCTTCTGTCGGGCTTTGAATTAGAATTACTTTTAA
TTTGTAATTTCTTCTCATCTACTCATGTTATATCTTTTTAATTACTTTTA
GGAGCGACTTTGGAAGACAAGTGCTGCTGCTCAAATAGGTTGTCAAGCTG
CATCTGCTGCGCGATTAAAATTTGAAGAACAAAAACAAGTCACCCGCAGA
TTGGCCAAAGCTGTTATGGATTTTTGGTGTTTGGTAGAGGTAGTTCCAGA
TATTAGTTCGCCACATTTTTGTTCTTTAGTATAAATATGCATTTATGTGA
TTGAGTGAAAAATCATCCGTGTAGTTATTGTTGCAGGTTATACTGGTTTC
GTGCCTAATAATTCTTGCAATAACAGTAACATCGGTTTTATGTACTCATT
TTTTGGATCTCTTCCTTTTTACAAAAATTTGCAACATTAGTCTCAAATTG
TTTTGGTTCATATTAGAGTTTGCAGGTTCTGCGTTCCTCATTTGAATTTT
CTTCATGTTTTTTTTTGATGTGATTCTATTATCCCTTCAAGCAGGTTGAA
GCCTCAGTCTAAAAAATCCACAAAGCTTCAAACGTAGAAGTGGAGGATCC
GATACATGAATTCTTTCATTGCTATACCTTTATATTAAGCTAGCATCCAG
AATTTTATGTAAAATTTGAGATACATCGGTGTTGATTAATACTTGCTTCT
CGTTATTCAATTATATAAAAATCTAAAAGGCAGCACAAGGCTACTCTTGG
TACCATATGTCTTAAAAAGAAAAGGAATTAAGTTTACACAAAAATAAATG
AAAATCATTGTATTTAATGAGTTAATTATACATGCTTTGTAGGTTTCAGT
TAAGCTGTACAGGCATTACCTAGGTGGAAACCCTAGTGAAGCTGTAGAGG
AAATAAGAACCCTAGCCTGGTTTTTGTAAATATTTCTGGAATAGTGCAAG
TATCAAATGCCCAGCTGTGATCTCCCGAAAATATGCCTGTGTATGGTATT
TGCTGATTGGTTTTAACTTAGTTGGATTTTAAAGATAAAAAGGACTATCT
GCAGCTTTGTATACCAGTTTTTCAAAATTTTTAACCATGGCTTTATATAT
GATCAGCAATTAAACTATATAATATATTTAAAAACTTTTGTAATTAGCAT
CTAGCAGTGACATGACATTGTAAATCTAGAATATTTGTTGTCTATTCGTG
GAATTCCTTTATATGTTTGATCAGTGTCTTTTTGTGTACACTTGCCTCCT
ATGTGAGAATCGCTTCTTTGTCAATAGCGTAGTATTGAGCTTAAAAATTG
ACATTTATCTTTTTTGAGGAAATCTTGGGGTTAATATATACGGGACTACT
GATAACGGTCTTGCTATCTGTGGTGGTGCGGCAGGAGATGAGCAAAGAGC
AGGAGATGAGCAAAGAGCGGGAGTTTCAAAAGCCTGGCAATGATTTTGGA
CATGCAGTTCAGGGATATGCATTGAGATTTCTACAATATAATAGCTCCAC
TGTTCAATATGTCCAAGCAGAAGTAGCTGCTACTCCTATTATATCCAATT
TGGGTGTTGTGGACATGTCATGGAAAGATCACTTAACAGAAGTATGGGCC
ACTAGTTAATGCTATTTGTAACATAAGAACTGTAATTGACAGATTGATTT
TTGCAGCGTAGGCATTATTCAGGATCTAACCTATAATGTAGTTAATACTC
AGATGGTTCTAATATATGTTTCTTGTTGACATCTATATCTTCATTTTGTT
CAGGAGAACCTCTTTTATTCAGTTCCTGCTGGTGCAATGCAAATCTACAA
GAAATCTATCGAATCCTACTTACTGCAATTGGAGGTAGTAGACATATTGC
TTACAACTAATGCATCTTATTGGTTAACTGGAAAGTTATGATAGCCTTGT
CTCCTTTATGTGCTTCTGGTTGATTCATCCATAGAAAAGACAGAAAGAGA
GAAGTATTGTTTGTCTGTTTATGAAATCAACTTATATGTCAATATATAGT
TATATATACTATCATAATGTTTGAAATATACGTGTGTGTGTGTGTGTGTG
TGTGTATGCACACATATATATGTATTCCTATGTTATTGCATATATAGATA
GGTGGTGTTAGCAACTTCTGTAACTGTAGTAGTACATGTCAACAGGGATG
GTAGGTGGTGTTAGATACTTCTGCAACTGTAGTAGTACATATCAACAGGG
ATGGGTATTTTGGTAAAATACTATAATCTAATTACTAGAGTAATGTTCGT
CAAAAAAAAAATAAAATTACTAGAGTAATGTGGGTGAATTTTTCAACTCT
TTCGCTTCTTTTTTATTTAATAGTCAAATCTATAGTATGCATCTTTTTTT
CTTGTCACTTGATTCCAGACATGTTCAATTTAGGTTTTTGCTGACATTTA
TATATTTGCATATGCATTTGTTAACAGGCTTATTATCAACATCACAATGG
GGTAGTATACTACTATTACGGCATATTTGTTTTTATATTGTTGGTTGTCA
TTTCTGAAGGACTTGTATTATTTGCATATTTTGTCTAGTTGACTGCCAGC
CCACTGTTCCCTTCACGCTTTTGATTTACAGTAAAGTAATTTCTTAGATG
TAAATGTAAGACCTGGAGTGGGACTGTGGAAGGAACATTTTGGAAAAAAG
ATTGCCACTGTTTAAATAACATTGCTATTTTGGTACTGTACCCGTTTATG
CTTTATCAAGTTTTTCTTCATATTATGCAGAGTTTCATGCCCTCTAATGT
ATAATCGTCACAAGTAACTGTAATATTGGTTTTATCATATTCCCTTCAGC
TTACTGTCATGGCTTACTTCAATATATTGATCACGTTAATTGTTTTCTTA
TGGTCAACGTCCTTAGAAAACTGGCATTTGCATGCAAGAAGAAGTGGAGA
CATCTGGTTATGATGCCGTGGCAGGTAATGGGAGACTAAATGCAATTTAT
CTGTAATTGGTTATATGTTCTTTATGTATTTTAACAAGTCAGTAACTTTT
ATAGATTATGATTCCCGAGAGAACGCCTTGGAAGAGGATGAAGGAGACGC
AAACACATTTTATTTGCCTGGAGCCTTTGTGAACAGCAGGCCATCTAAAC
TGGAGCAGAAAAAAAAGAGACATTTAATAAAGGGATTTGCAGCTAAATCA
TATGACATGGTATCTGATTCACCATTTATGCAATCCAATGAAAACAAATC
CGGAAACCATCGATCTGTTTTAACTGGAAAAAGGACCTCCGACGCTGATA
ATGGCTCAATTCCAACAAAGCGAATGCGAACAGCTTCACGGCAGAGAGTT
TTAAGTCCTTTTAATGCAGGAGCTCACGGCTGTCTTCAGGCACCAAGCAA
GACAGATGCTTCTAGTGGTGATACGAACTCTTTTCAAGATGATCAGAATG
TTTTGCATGGTGGATCCGTTGTGCTCAATAATATGGAGGTGGAGTCTGTA
CGTAACTTTGATAGGCAACCACAATTCGACTCTGAAGTATCACATAGACC
TAAAAAGAAAAAGAAGACAAAAAATTTGGTATACTACAGTCTGAAAAATA
ATTGGGGAAGACTTCATCCCCTCTTTTGTTCTTAGCATAACGTTTTCCTG
TTAAGTCTCCTTGTCTGTTTTATTATTATTCAGTGGAGCATGTCTGTTTC
AGGGTTCAACATATGAGCACAATTGGAGGTCTAATTCCAATTTCCAGGAT
GAGCAGGTAATATATTGTTTGTCTGTTCGGTATTTTGTGGTTTTTGCATC
ATACAACCGATCTGAAATGTAAATTACCTGGTGATAGTTCTACTTCCTAA
CTAGGCGAAATTAGTATTTCACAGAAAGACCTAGTAGATAAATGGACAAC
AGGTACTGTTTGTACATGTAAAATTTGGATTTAAGAATGTCAGATTTCAG
ATTTTTAAGATTTTTGCTGTGAAATGTAGCTGTATCTTCTAAGTCCCATT
TTTTTTTTTTGCACTAAATAACTCCCATCTTTTTGACATTGGTTTGATGT
TTTATTGGTTTTGCTTTGGCTAGTAATATGTCATTGGTTTGGGGTTTTGT
GATGTTTCCCCCATGTCTCTTCTTTCTTGGAATTTCACTGGTAACAATAG
TTTGAATGTAAGGGTGTATTACTTTAGGAGCCTGGGATCCGCAGCAAGTT
ATGTAGAGAGAGAATTATTCTTCACATCATGCATTAGATCGAGATAAGCT
TATGTGGATTAAGAGGCTGAAAGAAAAAAAAAATAGCTGCTTGAACTTAT
GCAGGGCCTTCTTGATAGGCTTTCTGGTTCAGTTAGTAAGATGGTGGTTG
GAGATATCAACCTTGTTCTTATCTGCAAAATTGTTCACCTTCCACAATCT
ATGTCACCCTTTCTCCCCATCTCTGGTCAACTAAATTTTCTGTCCATGTA
ATCTTCTCACATCTTTTGATATGCCGTTTCTGTGCTCCAGTCTATATCAT
CCAATACAACTTCATTCCATATCTTATCCAATTTATTATGTTCAGTCGGT
GTTATTTCTTTGTTTGAACCACATCTTAAGTTCACTTCTCTCTCTACAAG
ATGCTGTAAGAAAATGATGCAAGGATAGATTTCTGTGTCTTCTGAAAATC
ACTAAAAGATTAAAAACCAAATGGGTAAAGGCTAGTAAGCGATATATCGG
AATAGCAAGTGAATCGTTTAACATGTATTGGATAAGTGAATCCAACAATA
TGTATATGATAGTTTGATACTGCTTGATTCTTAAATTTATTCCTTGGCGA
AGTCATAAATTTTTTTTTTTTTTTTTTTAAAGTTTCGGACAGTCGATATT
AGTTTCCTTTAGTATATATGGCTAGTTGTATAAAAGTTCTTTTGTAATAT
GTAAATAATAATAAGTTAACAATATAAACTGATTTCTTATAAATATTTGG
TCCAACCTTGCTTAAATATTTTTCGTATCTGATATTTTTCCTCCCCAAAA
TCAAATTCCATTTGCCAATTGCGTCAAACTAAAACCTGACACAGATAATG
AAAAACATCAGCTATCCCATTTGTGCTTTAGAGATCTTTTGATCACCTGG
GTCTAGGTCTGTAGGAAGTTAATATATTTGATAGCTATATATTAATGCTG
CATGTGCAAAGATGCTTCCCTTGCGGGGACAATATCCTTTTATATTGACC
TTTGAATTTATCTAGCAGTTGCCTATGAACTGTTTGGATGTTTTGCAAAT
AACATGATGCTACTTAAATTGGTCTTGCTTTGCTCCATAATTGACAATAA
ACTACGCTAGCATATGGCTGATGTATCGATATCTAATTTTATATATTGAC
CAAACTTATTTGTCCATCGTGATGCAGAGAGATAGTTATAAAAGGAGATC
GGAGAGTCATCAGTTTGAATCAAATGGAACCAATGGTACTTTTCAAAAAA
GAAAAGAAAAGAAATGTTAATGATACTTTACTTTGTAACTTATCTTTATC
CTAACACCTCCATGTTTTCTGAAGGTTTATATGGTCATCATATTGGTAAA
AAACCAAAGTTAATTAAGCAGTCACTGGATAATTCGATTGACAATGTCGC
TCCTGTGAATTGTTCACTCTCTTCCCCTGTGGCTTCCCAAATGAGTAACA
TGCCTAACCCAAATAAGTTTATCAAAATGCTGGGTGGCCGGGACCGGGGT
AGGAAAATGAAAGGACTGAAGGTAATTTAAAGAGAATGACATGCAGATTA
CAACTTTTACTCTTCCTCTTAATCTACTTTTATCTGAGTGTCATATAGTT
ATAATCAAAATAAACAAAATGTTGCAGACAGCATCTGGACAGACAGGTCC
GGGAACTTCATGGTCACTGTTTGAAGACCAGGTGTGTTATTATTATTATT
ATTATTACTTCTTAGTTTTTGTATGTTGTTTAATGGTCGAAGCTTATGTA
TCGATAGACAAATACCTTATAATACTATCTGCTGTGATTTATATAGGCCC
TTGTTGTTCTCGTCCATGACATGGGTCCGAACTGGGATCTCGTCAGTGAT
GCTTTTAACAGCACTTTGAAATTCAAGGTAGCCATTTCTTTTCACGAATT
CTGTGTTTAGTTTCCGCTCCTCAACATCTTGGGTGCAGGATGAGTTCCAT
GCTTTTATTTTATAGTATATTTGCGGTATTGACAGTTTGACACATCCATG
GTTCACTATTCGGATATTTTATGTGTAGGACCAGATACATATATTCTTTG
TCCATCACATATAATTTTTGTCTGAAAATGTACTTAATTATTTTCATATA
AAGTGCATATTCCGCAACCCTAAAGAATGCAAGGAGCGTCACAAGGTTGT
AATGGATAGCCCTGGTGGCGAGGGGGCGGATAGTGCTGATGATTCAGGGT
CATCTCGACCATATCGCTCTACTTTACCTGGAATCCCAAAGGCAATTTTC
TCTAAAAAGTATTTCATTGGTTCCTTAAAATTATTTGACCTTGATGTTGG
TAGTAACTGGTGATCCTGCATGTTATACAGGGTAGTGCGAGACAGTTGTT
TCAACGTTTGCAGGGACCAATGGAAGAGGATACTATCAAATCACATTTAG
AAAAAATTACAGCAATTGGGAAAAAACAGCATCATAGAAGGGCACAGGTC
GGCCTATTTAGAGAAGTATTTTGCATTTTATATTTGTATATCCCTTGCCT
ATTGTTTGATCTGTTATTTAAATTGAAACGGTAATTTTCAGGGATTTACC
TGACTTATGCTATGAAAAATTTTAAGTTACCAACATAATATGTGTGTGTG
TGTGTGTGTGTGTGTGTGTTTCGTAAGGTTTCTATTGTCCTCTTTTATAT
TTGGTGAATGTGGTTGAAAAAAAATAGGGGGTTATGTTGCATAGTTAGTG
CTGTCATGCTATATATCTAAGGAGTTTTCTTGAACTTAATTCAGTTCTAC
AATATTTGATGTCGATTTGAAGAATTTATTTCGTGCTCTATATATCTTCT
TGCTTTGCTAGAGATTGGAAAAATGTATCATCTATATTTTTATAAGTCAA
CACAATGCACAGCTGATACTATAGATAAAGATAGGAAGGCTTTTTGTATC
ATGAAACTATATTTCTTGTGAAGTCGGTCATTCAGAATGGAAATGTCTGA
ATTAATTAACTTAAGCTTTATCAAATAATGAATATTTTCCTGATTTCTAG
TATTGTAGTCCAGTGTATACCCATTTTTTCTTGGTAACAGAGGAAGTGAG
TTTGATTCTCAGTGAAGGCATAGGGGTGTGCCTAATTATATTTTTGTAAT
TGACCAATACCAAAAAAGAAACAGATCATTAAAAAATAACCGCTGCCCAT
TTATGTCATTCTGTTTATCTTGGACTTTGTTTGAATGATCTCTAGGATCC
AAAGCATCTCCAGCAACCCCACAATTCTCATACATATGCGCTGTCTCAAG
TCTGCCCAAATAACTTGGATGGAGGGCCTGTCCTGACGTAAGTCTGTCTA
GTTTGTATCATGTATACTAGGTTAACATTTTCAAATTTATGTATCTATTT
TTCCTTCTATAATGGCACAATTAATCTTAATAACTCTCTTTATAATATTT
CCCATTATAGGCCTCTTGATCTGTGCGATGCAACTGCTTCCAGTCCAGAT
GTTCTTTCCCTCGGTTATCAAAGCCCTAATGCTAGTATGTTACCAAATTC
AAATCAGGGTAATGTTGCACCAATGCTTCCTGCTTCTGGTGTGACATCCA
CAAGTGCTGTTCCTGGGAGTAATTTCTCGTCAGCATCTAGTCAAATCAAT
GCTTCTGTTAGGTAATATTCATATAAAAATGTATTTGTTATATATTTTGT
AAGTGTTTTGTTTTGAGTTTTATGATTATATCTCTGTATTCTGCTTCAGG
GATGGTAGACCTGGCATCGCGAAATCTGTATCTATATCAACTGATGAGCA
GCAGAGACTGCAACAGTACAGTCAAATGATATCTGGTAGAAACTTTCAGC
AGTCCAATATGCCTGTTTCTGGGGTACATCCAGGAACTGATCGTGGTGTT
CGCATGCTAAGTAGTGGTAATGGTGTCGGCTCTCCTAATGGATTGAATAG
AAGCATGCAGATGCAGAGACCAGGACTTCAAGGTGTTGCCTCATCAAACA
TGGTTGGTCCTGGCAGCATGCATCCCTCTGGCATGATGGCAGTGCCAAAC
CCTGTTAATATTCACTCCAGTCCTGGTGCTGGTCAAGGAAACTCTATGAT
GAGACCTCATGATCCTATGCATATGATGCGGGTGAGTTATCGAGTATTTT
CCTGATCTCAGAAATGTGTTTCTACATATTCGTATATCAAAATGCTTTTC
AATTTATAAGGCTGTGATACATGATATGATAGTCTAACAATCTGAATTAT
TAATTGGGGGCTTTTTCATTAAGGTCACTATAGTGCTTTATCTCGGAAAA
GAAGATACTGTTTGCCACAGATTCTTGCTAATTTACACTGTGCCTCTAGT
CCCCTTCAGCGTCCTCTAAAAAGATTTGCTTCGGAAGTCAGTAGTTAGGT
ATTAGAGAAAGAGAGGAGTCGGACAACTAAATTGTGACCTACGGAATTTA
TCATACGTGCTGGCTTTATTGAGAATAAGTCTGAAGCTTATTTTAATTTG
CATATAGTATAGGTGAGCTTACAAGGAGTATTGAAGATCTGGATCATGGC
ATGTCCTATCTTCAGATGGTATCATATATTAGACGAGGATTCCAAGGTGA
GATGATAAAGTTATAATTGTAGTGAGATAACTAAGAAATTAAAGGTTTTA
GACTTTGTAGATAGCCACTTGGAGATTCACGAACTTCAATTTCAAGGACG
TGCAAGAGGTGTCCATAAACAAGACATTGTGATAGACAAATCTGTTTTAA
GAGATCGCTCGGCATGTAGCTGAAAGGTGCAGTTACATCGAATCCGTAGA
GGATTTTGTGAGCGTACTGCTCCTATGGAACCTATCACTAAAATACCCAT
AGACGGGGATAAGGCTATACGGTCTGCTAGTAAAACACTCCCAGCCTAAG
GTGTACTGGTGCTTGTGGCACCAGGAGCCGTTGCACAGTAGCAAAGAACT
AGAACCAATATTTCCAGATAGGCTCTAGTAGGGTTAACTGGACAGTTTAA
AAGAAAAGTTTCGTCTTGTGAACATAGCGGTGCAAAGAAATTGCAATTTC
TCAATTGAAAATTTGATCAGACTAATAAAGCTAGTTCATTTTTTGGCATT
AGGCAATGGAAATAACATGCCTGATTTCAAATGCTCGTTGTAATGTAAGG
TCATTGTCAGCCACATATTTTATAATTGTGAAATCTAAAGGACAGTCACA
GAAAAGTGGGGACAATATATTTTGAGGGTTGAGGCGCAGATAAAAGATAA
TATCGTGTAGGTCTAGTTTTGTCAGACACTCGTCCATGTTGAATTTGATT
TTGACACATGTCGATAGAGTGAGCTGTCACATGACTTGAAGTAGCGAGAA
AGATGCACTTTGTGAATAATGCTATCATACTATATTCCTTTACAAATATG
TAATGTGAGGTCTTATAGGACAATGCGCTGAATATGCAAATATCATAGCA
ATTTATCATACTATATTCCTTTACAAATATGTAATGTTGAACTTATTTAT
GTTGTCATCTTGTTTAACAGTTTGCAAGTTTTTTCTCGTGCATCAGACTT
TGCTTTAGATAATCATTTGTTTCTGCTTTTCTTATGGTTTTTTTATATTG
TCGTTTTGTGTTGCTATGTGTTTTTGACTATAAGATGTGGAAATGGTAAA
TTCTTATCAATATTTTTATTACTATTGTAGCCTACTCAGAACGTGGAACA
TCAAAGGCAGATGATGATTCCGGAGCTTCAGATGCAGGTTTCACAGGGAA
ATAGCCAAGGAATAACTCCATATGGTGGATTAAATTCCTCGTTCTCTAAT
CAGTCGGCTGCCCCTTCTGTCCCATCATACCCACTCCATCACCAGCAGCT
GCATCCAATGTCAACCCAACACTCGCATGTGCTTACTAATTCTCATCATC
CGCATCTTCGAGGACCGAACCTTGCAAGCAACGCTCAGCAGCAAGCCCTT
GCCATTCGTATAGCTAAAGAGAGACATATCCAGCAGCAGCGTTTATTGCA
ACAGCACCAGCAGCAACAGTTTGCAGCGTCAAATTCTCTAATGCCACCTG
TCCCAGCACAGCCTCAGCTAGCAGTATCATCTCCACAAAATAGTTCCCAG
TCACAAACTAGTTCTCCACAGGTATCACTACCACCACTGACGACGTCATC
CTCAATGAGTCCAATATCGCAGATCCAACAGAAACATCACATTCCACCAC
ACAGTGTTGCACGGAACCCACGAGTTGGTGGCAGTGGGTCGACCAATCAA
GTGGGCAAGCAGCGGCAGCGGCATTCTCAGCAACTGCAGTTACAGCAGTC
TGGTAGGCAGCACCCCCAACAGCGGCATCAGTCACAAGTGCAACATCAGT
CACATTCGCACAATCAGAAGCAGTTGTCGTCCCATATATCTCATCAGCCA
CAACCTCAGCAAGTGTTGTATTCTGGTCAAACCACGTCATCAAAGCAGCA
CCAACAAACTCGTTCTCATTCTGAAAACAGCAATCAGAATCGTGTTTTAC
CAGTAGCTGGTCTTACATCTACTTCTGGTCAAGCTGTTCCACCGAACCAG
CAGCAGCGCCAACAGTCACAGGCTCTCCCAAAGTTAGTTAATCAACCTCA
GTTAGCTGTTCAAAGATTGGTTCAACCAAATCGTCAAGTAACCTCTGACC
AGTCAAACAGAGTTCAAGCTAGAGAAACTCACACCAGCCTGCACCCCACT
AATAGTTCATCTCAAGCTGTTTCATCTGCTGCAGCTCCTAGCTGTGTTGA
TGTGGCTAATGTAATGTCAGCTGACTTTTCTGCCAGTACTCCTCAGTTGA
AGGCATTGGATCAGGTGTCTGATTCCAGCATGTCTAATCCTGCAACACCA
ATTGATTCCGCTGGCACTCCACCTCTCACCATTGAGTCACTGCCCCCTGT
TCGGCCAGGGACAGACCACATTTACTCTTCAAATAGCTTGCCCTGCGTAG
GTCCTGGTGGTGCTGTACAGTGGTTAGAGGAGCCTGTACAGTTGGAATCT
CTGACGCCACCACCTCCATTGGAGCAGCAACAAGAGCATTTGAAACCACA
GCAGCAGCAAGAGGATTCTAAACAATCCCAAGAACAATCTCTACTTCTGC
AAGAAGTGGGTAATAGTACTAGTCCTCCTGAACAGTGACATTAGTGTCTT
TTAGCAGATTGAACAAGTCCTTGGAGCAGCTAGTCCTGCTATGGTTGTTT
CAGCATGCTTTTTTGCAACATTTCGTATGTCTGCTCCATATTAGAAATAG
TCCAGCTAGGATTGCGGTATTATGATATCAACAGATGCAATGTTGGTTGC
ACAACTTTTGTGAAACAGAGTTGATGATTTGCGGCTTTGTGCAGATGAAG
CTCAGAGTTGCTGGCAGGATTATGAGACAGGCAGGGGTTAGTAATTATTT
TGTCTACAGGTCGATTAGACTTGTTTGAAGGGATAGGGCGGGAATCATCT
TCAGGAATTATGTACATTACCATTACCCTAGAAATGCGGGAAGACTGAAA
CCAACATAGTTGTACTTGTACAGGGTTTCTATTCCCTTTTTTGGGTAGTT
CTCCTTTTTCTCCCTCCCTTCCCAGTCAGGGGCCCTGCTGATATGAGGGG
CTTATCACACCCCGCAGGTCAACCCCATGTATTAGTATTAATTATTATGC
CGCTGTGTGTAGTTAGAGATTAGTGATATCATTGTTGTAGTAAAGCTTAA
GGAATTTTTTGTGAATATAAAATCTTTGAGTGACACTGGCCAATCCATGC
TGTTTAGACTATCATTGTCACATCAATGTATTTACTATAGGTAATTAAAT
GCAGATTGTTTTCTCGGCATTTTACATAAA
Sequence Length:
16680
Sequence Checksum:
38e27ba903ab51f53b2b9ec83efa6f8c
View location in JBrowse:
Gene:
LOC108222828
Gene Biotype:
protein_coding
Gbkey:
Gene