MK006643 K4087

Resource Type: 
Genetic Marker
Name: 
MK006643 K4087
Identifier: 
MK006643_K4087
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK006643 K4087, is adjacent to primer, K4087_X.
The genetic_marker, MK006643 K4087, is adjacent to primer, K4087_Y.
The genetic_marker, MK006643 K4087, is adjacent to primer, K4087_Common.
The genetic_marker, MK006643 K4087, is located in gene, LOC108222828.
The marker_locus, K4087, is an instance of genetic_marker, MK006643 K4087.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr517.915K4087MapViewer
2016 70796 NG full mapChr517.915K4087MapViewer
2016 Integ NG full mapCH549.983K4087MapViewer
2016 80592 NG full mapChr537.192K4087MapViewer
2016 Integ NG bin mapCH549.559K4087MapViewer
Synonyms: 
  • MK006643
Sequence Coordinates: 
DCARv2_Chr5:31214955..31215006+
View location in JBrowse: 
DCARv2_Chr5:31214955..31215006+
Sequence: 
GKAATGGWAATGTACATAATTCCTGAAGATGATTCCCRCCCTATCCCTTC
AAACAAGTCTAATCGACCTGT
Sequences: 
>MK006643_K4087 ID=MK006643_K4087; Name=MK006643 K4087; organism=Daucus carota; type=genetic_marker
GKAATGGWAATGTACATAATTCCTGAAGATGATTCCCRCCCTATCCCTTC
AAACAAGTCTAATCGACCTGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GKAATGGWAATGTACATAATTCCTGAAGATGATTCCC
Three Prime Flanking Region: 
CCCTATCCCTTCAAACAAGTCTAATCGACCTGT
SNP: 
A/G