DCAR_004287 | CarrotOmics

Resource Type:

Gene

Organism:

Daucus carota subspecies sativus

Name:

DCAR_004287

Identifier:

DCAR_004287.gene

Locus Tag:

DCAR_004287

Publication:

Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.

Relationship:

There are 3 relationships.
Relationships
The mRNA, DCAR_004287, is a part of gene, DCAR_004287.
The genetic_marker, MK006193 K3637, is located in gene, DCAR_004287.
The genetic_marker, MK005005 K2449, is located in gene, DCAR_004287.

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
DCAR V1.0 Gene Prediction	For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here.

Transcripts:


Transcript Name	Identifier	Type	Location
DCAR_004287	DCAR_004287.mRNA	mRNA	DCARv2_Chr1:46506295..46513520

Sequence:

ATGAGCTTCCAAGTTGCATCAAGTTCCGGCGTCCATGATGCCGGAAAAAA
TAATAATCTGAAGGAGGAGGAAGAAAAAACCAAGAAACCGCCAACTCCAA
GCGTCTCGTTATTTAAATTATTCGCGTTTGCGGATTCTTTTGATTATTTT
CTAATGTTTTTTGGATCGGTGGGAGCTTGTATTCATGGTGCTTCTGTTCC
TGTTTTCTTTATTTTCTTTGGAAAGTTGATTGATGTTATAGGACTTGCTG
CTTTGTTTCCTGCTGCAGCTTCTCACAAAGTTGCCAAGGTAATTTTATTT
TTATAATTTAATTTAACTTAATTTAATTTAATTTACTTTTCTTCTTATTA
ATGATTTATGTTATTGTTTTTTGCAGTATTCGTTGGATTTTGTATATCTA
AGTGCAGTTATATTGTTTTCATCATGGATGGGTACGAGTCTGATTTCTAA
ACTAAATTGTGTTAATGTAATTAATATTGAATAGTGTTAATTAATATTGC
ATATTTGCATGTATATTGAATCGATAAAATAAAGAGGTGGCGTTCTGGAT
GTATACTGGAGAAAGACAAGCAGCAAAGATGAGGATGGCCTATCTGAGGT
CTATGTTGAATCAAGACATCAGTCTTTTTGATACTGAAGCTTCCACCGGA
GAAGTCATTTCTGCGATCACCAGCGATATTATCGTAGTCCAGGATGCCAT
TTCTGAGAAGGTAATTTCAGTATAAAAAAAATTACGATTTTTTTGAGTTA
CATTTTCTGTGAACAGATAAATATCGTAGCAAATGTTTTTTTGACGGGAC
TTGAACTCTCGACATTTTATTAGCGATGGATGATAAGATGCGGGTATTTG
TCAGCCTGTCGGGTTAACATCACTAAATTTTAGGAAAAATTAATTAGACA
CTAGTAGAGATTATAGTGCCGGTAAGTTTCAAATTTAGGACCTTGATTTT
GATATCTGTAAACTAGACACGGTAACAAAATTCAACATCATTGATGGCTT
TACCACCAACTTTATTAATAACACCTCCAACTGTCCGTCCCATTTGACAG
CCTTACACTACAAACTTGCAATATGATTTTTTTTTTTACTTTTTTTCCAT
GATATATTTGAGATCTCGAATTTAATCATCAAATTCGCGTGTTGGGCATT
TGTGTAAGGGAGTATAATTTTGGTCGATTCATCGGACTTGGTATAATTTC
TCAGAATTTTAGTATGAAGCGGGGATAGTAGTGTAAAGAAATGGAAGAAA
CGGATATTCCTGTTGAGAGGCTGTTGTTATCATCCCTGTAACGAACAGGA
GTGAGAAGTGGGGCGAAGAGAGAGTTCAACTTGTCTTACGAGAGCAGTAT
TAATGGGTGGGTTCGGAGTTGAGTGAAAGTTGTGTTTGGTTTGGTGGTTG
TGAGTTTCATTCTTTGGCTAATATGCTTCTCACATCTGCATGAATTGACA
CCCCTATTAATGTCTCTTGTATTTTATGCACTCTATTATTGATCGAAAGT
GATTCTTATTTTTCATAATTTTTTCATTGTTTTTAAAATGATTAATATCC
AAATAACAAATTAAAATCATTGTAATGCACATTGCACAATAACAAGCCTG
CAGACTCTGAATCATATGACCCTACCTAGTATGATCCTGCATCAGTTGAA
TGAACTTTGGTATTCATCATTTTTGGTTCATTGTTTGGTAATGATCTCTT
GATTTTATTGGTTTGATCTTGGTGAAATTTGAATGGCAGGTGGGAAACTT
TATGCACTACATAAGCAGGTTCATAACAGGGTTTATAATAGGGTTTATAA
GGGTATGGCAGATAAGTCTTGTCACACTCTCCATCGTTCCCCTCATAGCT
ATTGCTGGTGGTGTTTACGCTTTCGTTGCTTTTGGTCTCATTGCCCGTGT
CCGCAAATCCTATGTCAAAGCTGGGGAAATTGCTCAAGAGGTCTCTCCTC
TGACCTCTCTATCTTCACACGCATTCTTATGATCACTTAAACAGACGGAT
ATATTTCTATTATCACTGCCACACGCACGCACACATTTTTATGATCACTG
CCATAAACGCAAAGATAACAATTTGCCTGGTAATGATGTAAGTTCTGTCG
AGGATGTGATTGTCAATTTCAAAAAGTAGATCCTGCTTCTTTTTTTAGTT
GCCTCATTAATAGTACTGGGATGAAATAGTATCTTGTTCTGCTTTTTGCT
CACATATTAAAAGCTAATTATTATAATAGATTCTATTATAAAGCAATTCA
TTTACTACCATTTACTGCATATATCATGTGGAATGTCATGCATTGTCTTC
TGCAGGTAAATATCCAATGTAATTGATTCAGATAAAATTTAACAGTGTTC
TAGAAGTATCAGTATGGATTTTTCGATTGTGATGTATGGATGCATTATAT
TCAAATCGGAAATGTTATGTTTCTGTTTCAGGTGATCGGAAATGTGAGAA
CAGTACAAGCATTTGCAGGGGAGGACAAGGCAGTGAAATCATATACATCA
GCATTACAGGACACCTACAAGTATGGGAGGAGAGCAGGTCTAGCCAAGGG
TCTAGGACTTGGCACCTTGCACTGTGTACTTTTCCTTTCGTGGTCGATGC
TGGTTTGGTTTACAAGCATAATTGTTCACAAGCATATTGCTAATGGTGGA
GATTCCTTCACAACCATGTGCAATGTTGTTATTGCAAGCTTGTAAGTCTC
TCTGGTAGTGTGATTTATTATGTGTTGCCATTATATTGAACATGCTGTTC
TTACTAATTCTCCTTTAATCCAATTATTGTCTGCCTTCGTATTAGAAGAA
ACTTTCTTTACCTTGGTCCCTTGACTTTGGGTTGCTGTAATAACATTCTG
CATTGTCAAAACATTTAATTACATGATATACATGATATAATTACATGAAA
AATAAAAAGTGGAACATTCCCAATAGCACAAATTTTTGACATATGTATGT
ATGACGGCACTTTTCTGATGCCCTCTTTGTTAGAGCTTCATATATCATTA
TTTGCACCGGTCCTTTTTCATATAATTGCAACATGCTGATGACGACATCT
CAGATAGTAGCCATAAGCTGTTGGCAAAAATGAATATTTTCAGTGTGCAG
TAGTGTGATTATCTGTTTTGCACAACTGTTGTGTAAGCAGATTCATGACT
TATCATATTCAAGGTCTGAGATTATGGAAAATAATATGCCTAGACCATTT
CAGGTCACTTGGACAGTCAGCCCCTGATATTACTGCATTTCTCCGAGCAA
AGAGTGCTGCCTATCCTATCTTTAAAATGATAGAGAGAAATACTGTAAAC
AAAAACAGCGGAAAAAAGGGTGGAAAGTTGCAGAAAGTTGAGGGGCACAT
CCAATTCAAGGACGTGTACTTTAGTTACCCATCCCGCCCTGATGTGGTAA
TCACCAATAAGCTCTGCCTTGATATTTCTCCTGGAAAAGTGATAGCACTT
GTGGGAGGAAGTGGATCTGGAAAAAGCACAGTTATATCGTTAATTGAACG
CTTCTACGAGCCCCTCTCTGGACAGATTTTACTAGATGGAATTGATATCA
GAGAACTTGACATAAAGTGGCTTAGGCATCAAATTGGATTAGTTAATCAA
GAGCCTGCCCTTTTTGCTACAACCATCAGAGAGAACATTCTCTATGGGAA
AGATGATGCGACCATTGAAGAGATCACACGTGCTGCAAAACTTTCAGAGG
CACTGGCTTTTATCAACAATCTTCCTGAAAGATTTGACACTCAGGTACAG
ATCCAAATTTACAGCTACTATAGTTCACTTGTTGGTTCAACACGAATGTT
GATCCCTGTAACACACACAAGGAGGGATATTGTATGGTCTACCTAAAACG
TACGGCATACTATATCTTCTGCTTTATACAGTACAACTGTGTTTTCAAAA
CATCTAATTAGCATTATAATAAAAGCGCAACATGGATGACCTTGTAATGA
TATTATACAATTTTATAGGTGGGGGAAAGAGGGGTGCAACTATCAGGTGG
GCAGAAGCAGAGAATTGCAATATCTCGTGCCATAGTTAAAAACCCTGCTA
TACTTCTTTTGGATGAGGCTACAAGTGCACTCGATGCAGAGTCTGAAAAG
AGTGTGCAAGAGGCCCTTGACCGTGTGATGGTTGGACGCACAACTATCGT
TGTGGCTCATCGGCTTTCTACCATAAGAAACGCAGATGTAATAGCTGTTG
TTCAAAATGGAAAGATAGTGGAAACCGGAAGCCATGAAGAACTTATTTTA
AAACAAGATGGTGCTTATTCATCGCTTGTTGAACTCCAGGAAGCAGCTTC
CAAGCAACAACTCCCCTCAAACGGTCCATTGGGACAACCACTCAGGTTCT
GCAAAAGCATACCGGCTCTTTTGTTTAATCAACTAATGGCCTCTATTACA
TGCTTTTCTTTATAAGAGATCATTATTATATTCTCCTTCCAAACTATTGA
ACAAACTCTTCTACTCTCTAATGACAATCTCCTATGTACAAACACTTATT
ATATTTTCTAATTCGTTTATGTACATATGCTAACATTTTGTTACCTCTGC
AAATAAAATTTCAGCAGTAAATTTTCACGTGAATTATCTGGAAGAACAAG
AAGTTTTGGCGGAAGTTTTCGTTCAGATAAAGAGTCTGTTGGCAAAGTTG
GTTTTGAAGTAGAAACTGTCAAGTCGTCTCCAGTTTCCTCTGGAAGATTG
TACTCCATGGTTACTCCAGATTGGATGTATGGGGTTTCCGGAACCATATG
TGCACTTTGTGCTGGAGCTTTGATGCCTCTCTTTGCCCTTGGTATCACTC
AAGCTCTTGTATCTTATTATATGGACTGGGACACAACACGCCATGAAGTT
AAAAAGATCTCCCTGCTCTTCTGTGTGGGCGCTGTTGTTACTGTCATCAT
TCATGCTATTGCTCACCTGAGTTTTGGGATAATGGGAGAGCGCCTTACTC
TTCGTGTTCGTGAGGGAATGTTTTCTGGTAAAAATTTGCGACAATACCTT
CTTATTCTCCTTCGTTTATCAACTTTAATGCTGACTGGATCACGCAAATG
AAACAATATATTTCTTTGTCGTACATCAATCTAAAAGTTGGCAATACAAT
AGTAGACAAATTAGAAGTTTGTATATTTATTTCTTAGCATATGCTATACA
TGCTTTTATTATAAAAAAAATAAGAAAACACAACAACCTTGTGGTAAGAT
GGTATTTCCCTTGCTCTTTTTACCCGAGGTCGAGAGTTTGAACAAGATTG
AGTGTGTGAGTATGTTTAATTATCAAAAAGAAAAAAGGAAAGATTTATTT
GTATATCTCTTCCCTTTGATAAACTATGACCTTGAATTTTCATCCTTATC
TAAATAATCTCCTACATCTTCTTGCAGCTATTTTAAGGAATGAGATCGGA
TGGTTTGATAATACAGAAAACACAAGTTCTATGCTCGCATCTAGATTAGA
GAGTGATGCAACTTTACTGCGAACTGTTGTTGTTGACCGCGCTACCATTT
TAATACAGAATGTAGGTCTGATCATCACTTCATTCATCATCGCTTTTATT
TTGAATTGGAGGCTCACACTTGTTGTCATTGCCACATATCCGTTGATCAT
AAGTGGCCACATTAGTGAGGTTTGTCTCACTTGCCGCCTTACAGTTACAG
TTGTTTTAGTTTATGACCTCTTATCTTATCTGTAGTTCCATATTGGATTG
ACCTCCGTACATTTGATCTCTTTCTTTTTGTTCCTTTTACTCATACTGAC
TCTGAATTCCTTTCTAGAAACTCTTCATGAAAGGGTATGGTGGGAACTTG
AGCAAAGCTTATCTTAAAGCCAACATGCTTGCTGGTGAGGCAGTGAGTAA
CATTCGCACTGTTGCTGCATTTTGTTCAGAGGAAAAGGTACTCGATCTTT
ATGGGCGTGAGCTTGTGGAGCCTTCCAAGCGTTCGTTTACTCGTGGTCAA
ATTGCTGGTATATTTTATGGAGTCTCGCAATTCTTCATATTTTCAGCTTA
TGGCCTAGCCCTGTGGTAAGTACCCCAAGTCCTGTAGCCTTTTGTGCCAT
ATATTATATTATCCATATTTTTATAAGAAGCTTATATAGATGCTATAAGG
TGGAGCTTTGATACAAATATATATTATGCATAGGTATGGTTCTGTTTTGA
TGGGAAAAGGACTAGCTAGCTTTAAGTCTGTTATGAAGGCATTTATGGTT
TTGATAGTTACTGCATTAGCCATGGGTGAAACATTGGCAATGGCACCGGA
CCTTCTAAAAGGTAATCAAATGGTAGCATCAGTTTTTGAGTTGCTGGACC
GTAAGACAGAGGTGGTGAGTGATGTCGGAGAAGATGTCACTAAAATGGAT
GGTACAGTTGAGCTCAGGGGTATTCAGTTCAGCTATCCCTCAAGGCCAGA
CGTTCTAATTTTCAAAGACTTTAACCTAAGAGTTCATGCAGGCAAGACAA
TGGCTCTAGTAGGGCAAAGTGGATCAGGAAAAAGCTCTGTACTTGCTTTA
ATACTTCGATTTTATGACCCGTTGGCTGGGAAGATTATGATTGATAGTAA
GTTTTTCAAGAGTATCTATTAACTTGAGACACTGAACTAGGAATAACTTA
ATACTGTAATGTTCTTTTTGGTTTACAATTTTATATAAGCAAGCAGTCTG
ATTTAACAAGCACGTGATCAACTCCCACAGGCAAAGATATCAGGAAACTA
AAGCTCAAGTCTCTCCGGAAGCACATTGGTCTTGTCCAACAAGAACCAGC
TCTGTTTGCAACATCAATCTACGAAAATATACTTTATGGTAAAGAGGGAG
CCTCTGAGGCTGAAGTAATAGAAGCTTCAAAACTTGCTAACGCGCATAGT
TTCATCAGTGCTCTTCCTGAAGGCTACTCAACTAAAGTTGGAGAACGCGG
TGTGCAATTGTCTGGTGGTCAGAAACAAAGAGTGGCTATTGCTCGTGCTG
TTCTAAAAAACCCTGCAATTTTGTTACTAGATGAGGCCACAAGTGCTCTT
GACGTGGAGTCTGAGCGTATAGTACAATCCGCTTTAGACAGACTTATGCA
GAACCGAACAACAATTGTGGTGGCACATCGACTATCCACCATAAAAAATG
CAGACCAAATATCAGTTTTGCAGGATGGGAAGATGGTAGAGCAAGGAACT
CACGCCACTCTTGTCGAAAACAGAGATGGTCCATACTACAGATTAATCAG
CCTACAGCAGCAGCAACAAATGTAA

Sequence Length:

7225

Sequence Checksum:

23e30465eff082c1669d7e047e376709

View location in JBrowse:

DCARv2_Chr1:46506296..46513520-

Cds:

>DCAR_004287cds ATGAGCTTCCAAGTTGCATCAAGTTCCGGCGTCCATGATGCCGGAAAAAA TAATAATCTGAAGGAGGAGGAAGAAAAAACCAAGAAACCGCCAACTCCAA GCGTCTCGTTATTTAAATTATTCGCGTTTGCGGATTCTTTTGATTATTTT CTAATGTTTTTTGGATCGGTGGGAGCTTGTATTCATGGTGCTTCTGTTCC TGTTTTCTTTATTTTCTTTGGAAAGTTGATTGATGTTATAGGACTTGCTG CTTTGTTTCCTGCTGCAGCTTCTCACAAAGTTGCCAAGTATTCGTTGGAT TTTGTATATCTAAGTGCAGTTATATTGTTTTCATCATGGATGGAGGTGGC GTTCTGGATGTATACTGGAGAAAGACAAGCAGCAAAGATGAGGATGGCCT ATCTGAGGTCTATGTTGAATCAAGACATCAGTCTTTTTGATACTGAAGCT TCCACCGGAGAAGTCATTTCTGCGATCACCAGCGATATTATCGTAGTCCA GGATGCCATTTCTGAGAAGGTGGGAAACTTTATGCACTACATAAGCAGGT TCATAACAGGGTTTATAATAGGGTTTATAAGGGTATGGCAGATAAGTCTT GTCACACTCTCCATCGTTCCCCTCATAGCTATTGCTGGTGGTGTTTACGC TTTCGTTGCTTTTGGTCTCATTGCCCGTGTCCGCAAATCCTATGTCAAAG CTGGGGAAATTGCTCAAGAGGTGATCGGAAATGTGAGAACAGTACAAGCA TTTGCAGGGGAGGACAAGGCAGTGAAATCATATACATCAGCATTACAGGA CACCTACAAGTATGGGAGGAGAGCAGGTCTAGCCAAGGGTCTAGGACTTG GCACCTTGCACTGTGTACTTTTCCTTTCGTGGTCGATGCTGGTTTGGTTT ACAAGCATAATTGTTCACAAGCATATTGCTAATGGTGGAGATTCCTTCAC AACCATGTGCAATGTTGTTATTGCAAGCTTATTCATGACTTATCATATTC AAGGTCTGAGATTATGGAAAATAATATGCCTAGACCATTTCAGGTCACTT GGACAGTCAGCCCCTGATATTACTGCATTTCTCCGAGCAAAGAGTGCTGC CTATCCTATCTTTAAAATGATAGAGAGAAATACTGTAAACAAAAACAGCG GAAAAAAGGGTGGAAAGTTGCAGAAAGTTGAGGGGCACATCCAATTCAAG GACGTGTACTTTAGTTACCCATCCCGCCCTGATGTGGTAATCACCAATAA GCTCTGCCTTGATATTTCTCCTGGAAAAGTGATAGCACTTGTGGGAGGAA GTGGATCTGGAAAAAGCACAGTTATATCGTTAATTGAACGCTTCTACGAG CCCCTCTCTGGACAGATTTTACTAGATGGAATTGATATCAGAGAACTTGA CATAAAGTGGCTTAGGCATCAAATTGGATTAGTTAATCAAGAGCCTGCCC TTTTTGCTACAACCATCAGAGAGAACATTCTCTATGGGAAAGATGATGCG ACCATTGAAGAGATCACACGTGCTGCAAAACTTTCAGAGGCACTGGCTTT TATCAACAATCTTCCTGAAAGATTTGACACTCAGGTGGGGGAAAGAGGGG TGCAACTATCAGGTGGGCAGAAGCAGAGAATTGCAATATCTCGTGCCATA GTTAAAAACCCTGCTATACTTCTTTTGGATGAGGCTACAAGTGCACTCGA TGCAGAGTCTGAAAAGAGTGTGCAAGAGGCCCTTGACCGTGTGATGGTTG GACGCACAACTATCGTTGTGGCTCATCGGCTTTCTACCATAAGAAACGCA GATGTAATAGCTGTTGTTCAAAATGGAAAGATAGTGGAAACCGGAAGCCA TGAAGAACTTATTTTAAAACAAGATGGTGCTTATTCATCGCTTGTTGAAC TCCAGGAAGCAGCTTCCAAGCAACAACTCCCCTCAAACGGTCCATTGGGA CAACCACTCAGCAGTAAATTTTCACGTGAATTATCTGGAAGAACAAGAAG TTTTGGCGGAAGTTTTCGTTCAGATAAAGAGTCTGTTGGCAAAGTTGGTT TTGAAGTAGAAACTGTCAAGTCGTCTCCAGTTTCCTCTGGAAGATTGTAC TCCATGGTTACTCCAGATTGGATGTATGGGGTTTCCGGAACCATATGTGC ACTTTGTGCTGGAGCTTTGATGCCTCTCTTTGCCCTTGGTATCACTCAAG CTCTTGTATCTTATTATATGGACTGGGACACAACACGCCATGAAGTTAAA AAGATCTCCCTGCTCTTCTGTGTGGGCGCTGTTGTTACTGTCATCATTCA TGCTATTGCTCACCTGAGTTTTGGGATAATGGGAGAGCGCCTTACTCTTC GTGTTCGTGAGGGAATGTTTTCTGCTATTTTAAGGAATGAGATCGGATGG TTTGATAATACAGAAAACACAAGTTCTATGCTCGCATCTAGATTAGAGAG TGATGCAACTTTACTGCGAACTGTTGTTGTTGACCGCGCTACCATTTTAA TACAGAATGTAGGTCTGATCATCACTTCATTCATCATCGCTTTTATTTTG AATTGGAGGCTCACACTTGTTGTCATTGCCACATATCCGTTGATCATAAG TGGCCACATTAGTGAGAAACTCTTCATGAAAGGGTATGGTGGGAACTTGA GCAAAGCTTATCTTAAAGCCAACATGCTTGCTGGTGAGGCAGTGAGTAAC ATTCGCACTGTTGCTGCATTTTGTTCAGAGGAAAAGGTACTCGATCTTTA TGGGCGTGAGCTTGTGGAGCCTTCCAAGCGTTCGTTTACTCGTGGTCAAA TTGCTGGTATATTTTATGGAGTCTCGCAATTCTTCATATTTTCAGCTTAT GGCCTAGCCCTGTGGTATGGTTCTGTTTTGATGGGAAAAGGACTAGCTAG CTTTAAGTCTGTTATGAAGGCATTTATGGTTTTGATAGTTACTGCATTAG CCATGGGTGAAACATTGGCAATGGCACCGGACCTTCTAAAAGGTAATCAA ATGGTAGCATCAGTTTTTGAGTTGCTGGACCGTAAGACAGAGGTGGTGAG TGATGTCGGAGAAGATGTCACTAAAATGGATGGTACAGTTGAGCTCAGGG GTATTCAGTTCAGCTATCCCTCAAGGCCAGACGTTCTAATTTTCAAAGAC TTTAACCTAAGAGTTCATGCAGGCAAGACAATGGCTCTAGTAGGGCAAAG TGGATCAGGAAAAAGCTCTGTACTTGCTTTAATACTTCGATTTTATGACC CGTTGGCTGGGAAGATTATGATTGATAGCAAAGATATCAGGAAACTAAAG CTCAAGTCTCTCCGGAAGCACATTGGTCTTGTCCAACAAGAACCAGCTCT GTTTGCAACATCAATCTACGAAAATATACTTTATGGTAAAGAGGGAGCCT CTGAGGCTGAAGTAATAGAAGCTTCAAAACTTGCTAACGCGCATAGTTTC ATCAGTGCTCTTCCTGAAGGCTACTCAACTAAAGTTGGAGAACGCGGTGT GCAATTGTCTGGTGGTCAGAAACAAAGAGTGGCTATTGCTCGTGCTGTTC TAAAAAACCCTGCAATTTTGTTACTAGATGAGGCCACAAGTGCTCTTGAC GTGGAGTCTGAGCGTATAGTACAATCCGCTTTAGACAGACTTATGCAGAA CCGAACAACAATTGTGGTGGCACATCGACTATCCACCATAAAAAATGCAG ACCAAATATCAGTTTTGCAGGATGGGAAGATGGTAGAGCAAGGAACTCAC GCCACTCTTGTCGAAAACAGAGATGGTCCATACTACAGATTAATCAGCCT ACAGCAGCAGCAACAAATGTAA

Pep:

>DCAR_004287pep MSFQVASSSGVHDAGKNNNLKEEEEKTKKPPTPSVSLFKLFAFADSFDYF LMFFGSVGACIHGASVPVFFIFFGKLIDVIGLAALFPAAASHKVAKYSLD FVYLSAVILFSSWMEVAFWMYTGERQAAKMRMAYLRSMLNQDISLFDTEA STGEVISAITSDIIVVQDAISEKVGNFMHYISRFITGFIIGFIRVWQISL VTLSIVPLIAIAGGVYAFVAFGLIARVRKSYVKAGEIAQEVIGNVRTVQA FAGEDKAVKSYTSALQDTYKYGRRAGLAKGLGLGTLHCVLFLSWSMLVWF TSIIVHKHIANGGDSFTTMCNVVIASLFMTYHIQGLRLWKIICLDHFRSL GQSAPDITAFLRAKSAAYPIFKMIERNTVNKNSGKKGGKLQKVEGHIQFK DVYFSYPSRPDVVITNKLCLDISPGKVIALVGGSGSGKSTVISLIERFYE PLSGQILLDGIDIRELDIKWLRHQIGLVNQEPALFATTIRENILYGKDDA TIEEITRAAKLSEALAFINNLPERFDTQVGERGVQLSGGQKQRIAISRAI VKNPAILLLDEATSALDAESEKSVQEALDRVMVGRTTIVVAHRLSTIRNA DVIAVVQNGKIVETGSHEELILKQDGAYSSLVELQEAASKQQLPSNGPLG QPLSSKFSRELSGRTRSFGGSFRSDKESVGKVGFEVETVKSSPVSSGRLY SMVTPDWMYGVSGTICALCAGALMPLFALGITQALVSYYMDWDTTRHEVK KISLLFCVGAVVTVIIHAIAHLSFGIMGERLTLRVREGMFSAILRNEIGW FDNTENTSSMLASRLESDATLLRTVVVDRATILIQNVGLIITSFIIAFIL NWRLTLVVIATYPLIISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSN IRTVAAFCSEEKVLDLYGRELVEPSKRSFTRGQIAGIFYGVSQFFIFSAY GLALWYGSVLMGKGLASFKSVMKAFMVLIVTALAMGETLAMAPDLLKGNQ MVASVFELLDRKTEVVSDVGEDVTKMDGTVELRGIQFSYPSRPDVLIFKD FNLRVHAGKTMALVGQSGSGKSSVLALILRFYDPLAGKIMIDSKDIRKLK LKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVIEASKLANAHSF ISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPAILLLDEATSALD VESERIVQSALDRLMQNRTTIVVAHRLSTIKNADQISVLQDGKMVEQGTH ATLVENRDGPYYRLISLQQQQQM*