MK005005 K2449

Resource Type: 
Genetic Marker
Name: 
MK005005 K2449
Identifier: 
MK005005_K2449
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005005 K2449, is adjacent to primer, K2449_X.
The genetic_marker, MK005005 K2449, is adjacent to primer, K2449_Y.
The genetic_marker, MK005005 K2449, is adjacent to primer, K2449_Common.
The genetic_marker, MK005005 K2449, is located in gene, DCAR_004287.
The genetic_marker, MK005005 K2449, is located in gene, LOC108204985.
The marker_locus, K2449, is an instance of genetic_marker, MK005005 K2449.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH161.393K2449MapViewer
2016 80592 NG full mapChr115.001K2449MapViewer
Synonyms: 
  • MK005005
Sequence Coordinates: 
DCARv2_Chr1:46508644..46508689-
View location in JBrowse: 
DCARv2_Chr1:46508644..46508689-
Sequence: 
TATCTTATTATATGGACTGGGACACAACACGCCATGARGTTAAAAAGATC
TCCCTGCTCTTCTGTGTGGGC
Sequences: 
>MK005005_K2449 ID=MK005005_K2449; Name=MK005005 K2449; organism=Daucus carota; type=genetic_marker
TATCTTATTATATGGACTGGGACACAACACGCCATGARGTTAAAAAGATC
TCCCTGCTCTTCTGTGTGGGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TATCTTATTATATGGACTGGGACACAACACGCCATGA
Three Prime Flanking Region: 
GTTAAAAAGATCTCCCTGCTCTTCTGTGTGGGC
SNP: 
A/G