MK006435 K3879

Resource Type: 
Genetic Marker
Name: 
MK006435 K3879
Identifier: 
MK006435_K3879
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006435 K3879, is adjacent to primer, K3879_X.
The genetic_marker, MK006435 K3879, is adjacent to primer, K3879_Y.
The genetic_marker, MK006435 K3879, is adjacent to primer, K3879_Common.
The genetic_marker, MK006435 K3879, is adjacent to gene, DCAR_018860.
The genetic_marker, MK006435 K3879, is located in gene, LOC108221994.
The marker_locus, K3879, is an instance of genetic_marker, MK006435 K3879.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr514.035K3879MapViewer
2016 Integ NG full mapCH552.549K3879MapViewer
2016 80592 NG full mapChr538.019K3879MapViewer
Synonyms: 
  • MK006435
Sequence Coordinates: 
DCARv2_Chr5:33914650..33924645-
View location in JBrowse: 
DCARv2_Chr5:33914650..33924645-
Sequence: 
GATAACTGATTYACAGTTCTGTTCCTATTGTAGGCAGRAAAATCCTTTTT
TGAAGACAAAGGTAAGCCYGT
Sequences: 
>MK006435_K3879 ID=MK006435_K3879; Name=MK006435 K3879; organism=Daucus carota; type=genetic_marker
GATAACTGATTYACAGTTCTGTTCCTATTGTAGGCAGRAAAATCCTTTTT
TGAAGACAAAGGTAAGCCYGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GATAACTGATTYACAGTTCTGTTCCTATTGTAGGCAG
Three Prime Flanking Region: 
AAAATCCTTTTTTGAAGACAAAGGTAAGCCYGT
SNP: 
A/G