Resource Type:
Genetic Marker
Name:
MK004060 K1504
Identifier:
MK004060_K1504
Organism:
Marker Type:
SNP
Publication:
- Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
- Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
- Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship:
Relationships |
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The genetic_marker, MK004060 K1504, is adjacent to primer, K1504_X. |
The genetic_marker, MK004060 K1504, is adjacent to primer, K1504_Y. |
The genetic_marker, MK004060 K1504, is adjacent to primer, K1504_Common. |
The genetic_marker, MK004060 K1504, is located in gene, DCAR_004427. |
The genetic_marker, MK004060 K1504, is located in gene, LOC108204440. |
The marker_locus, K1504, is an instance of genetic_marker, MK004060 K1504. |

MapViewer Marker Map Positions:
Map Name | Linkage Group | Position | Locus | MapViewer |
---|---|---|---|---|
2016 Integ NG bin map | CH1 | 67.352 | K1504 | MapViewer |
2016 Integ NG full map | CH1 | 65.103 | K1504 | MapViewer |
2016 70796 NG bin map | Chr1 | 54.475 | K1504 | MapViewer |
2015 Br1091×HM1 | Chr1 | 13.183 | K1504 | MapViewer |
2016 80592 NG full map | Chr1 | 13.183 | K1504 | MapViewer |
2014 J.Parsons Th. Br1091×HM1 | Chr1 | 13.183 | K1504 | MapViewer |
2016 70796 NG full map | Chr1 | 54.475 | K1504 | MapViewer |
2016 80592 NG bin map | Chr1 | 13.183 | K1504 | MapViewer |
Synonyms:
- MK004060
Sequence Coordinates:
DCARv2_Chr1:47969275..47969325-
View location in JBrowse:
Sequence:
GTTTCTTCTTGTTTTTCAATATTCTCGGAAACATCTGYGGTACTCTCTTT
GGAGCATAGGGCATCATTACC
Sequences:
>MK004060_K1504 ID=MK004060_K1504; Name=MK004060 K1504; organism=Daucus carota; type=genetic_marker
GTTTCTTCTTGTTTTTCAATATTCTCGGAAACATCTGYGGTACTCTCTTT
GGAGCATAGGGCATCATTACC
This is the primary representative sequence for this feature.
Sequence Length:
71
Five Prime Flanking Region:
GTTTCTTCTTGTTTTTCAATATTCTCGGAAACATCTG
Three Prime Flanking Region:
GGTACTCTCTTTGGAGCATAGGGCATCATTACC
SNP:
C/T