MK006124 K3568

Resource Type: 
Genetic Marker
Name: 
MK006124 K3568
Identifier: 
MK006124_K3568
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Parsons J, Matthews W, Iorizzo M, Roberts P, Simon P. Meloidogyne incognita nematode resistance QTL in carrot. Molecular breeding. 2015; 35(5).
  3. Parsons Joshua D. QTL for Meloidogyne incognita root knot nematode resistance and other traits of interest in carrot (Daucus carota). Ph.D. Thesis. 2014. University of Wisconsin-Madison
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006124 K3568, is adjacent to primer, K3568_X.
The genetic_marker, MK006124 K3568, is adjacent to primer, K3568_Y.
The genetic_marker, MK006124 K3568, is adjacent to primer, K3568_Common.
The genetic_marker, MK006124 K3568, is located in gene, DCAR_031835.
The genetic_marker, MK006124 K3568, is located in gene, LOC108201750.
The marker_locus, K3568, is an instance of genetic_marker, MK006124 K3568.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2015 Br1091×HM1Chr922.197K3568MapViewer
2016 80592 NG full mapChr922.197K3568MapViewer
2014 J.Parsons Th. Fig_3.5Chr926.953K3568MapViewer
2014 J.Parsons Th. Fig_2.4Chr926.953K3568MapViewer
2015 MB MergedChr926.953K3568MapViewer
2014 J.Parsons Th. Br1091×HM1Chr922.197K3568MapViewer
2016 Integ NG bin mapCH920.314K3568MapViewer
2016 70796 NG bin mapChr918.302K3568MapViewer
2016 Integ NG full mapCH918.668K3568MapViewer
2016 80592 NG bin mapChr922.197K3568MapViewer
2016 70796 NG full mapChr918.302K3568MapViewer
Synonyms: 
  • MK006124
Sequence Coordinates: 
DCARv2_Chr9:11832476..11832533+
View location in JBrowse: 
Sequence: 
ATGACTCCCTTATCTCGCATTCTTCTGTTCCACTTCCYGTTGAAGCTTTT
CTTGAGAGACTAGATGATCTT
Sequences: 
>MK006124_K3568 ID=MK006124_K3568; Name=MK006124 K3568; organism=Daucus carota; type=genetic_marker
ATGACTCCCTTATCTCGCATTCTTCTGTTCCACTTCCYGTTGAAGCTTTT
CTTGAGAGACTAGATGATCTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATGACTCCCTTATCTCGCATTCTTCTGTTCCACTTCC
Three Prime Flanking Region: 
GTTGAAGCTTTTCTTGAGAGACTAGATGATCTT
SNP: 
C/T