MK006127 K3571

Resource Type: 
Genetic Marker
Name: 
MK006127 K3571
Identifier: 
MK006127_K3571
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006127 K3571, is adjacent to primer, K3571_X.
The genetic_marker, MK006127 K3571, is adjacent to primer, K3571_Y.
The genetic_marker, MK006127 K3571, is adjacent to primer, K3571_Common.
The genetic_marker, MK006127 K3571, is located in gene, DCAR_027609.
The genetic_marker, MK006127 K3571, is located in gene, LOC108199664.
The marker_locus, K3571, is an instance of genetic_marker, MK006127 K3571.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH849.234K3571MapViewer
2016 Integ NG bin mapCH845.441K3571MapViewer
2016 70796 NG full mapChr817.602K3571MapViewer
2016 70349 NG bin mapChr814.113K3571MapViewer
2016 70349 NG full mapChr814.113K3571MapViewer
2014 70349Chromosome_814.113K3571MapViewer
Synonyms: 
  • MK006127
Sequence Coordinates: 
DCARv2_Chr8:21217323..21217373+
View location in JBrowse: 
Sequence: 
TAAAGATGCTCAGTAATGCAAATCTTTCTCTCATTTCSGTGGACATGCCT
GTTACTACAAACCATGATGAT
Sequences: 
>MK006127_K3571 ID=MK006127_K3571; Name=MK006127 K3571; organism=Daucus carota; type=genetic_marker
TAAAGATGCTCAGTAATGCAAATCTTTCTCTCATTTCSGTGGACATGCCT
GTTACTACAAACCATGATGAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAAAGATGCTCAGTAATGCAAATCTTTCTCTCATTTC
Three Prime Flanking Region: 
GTGGACATGCCTGTTACTACAAACCATGATGAT
SNP: 
C/G