MK006208 K3652

Resource Type: 
Genetic Marker
Name: 
MK006208 K3652
Identifier: 
MK006208_K3652
Marker Type: 
SNP
Publication: 
  1. Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
  2. Cavagnaro PF, Iorizzo M, Yildiz M, Senalik D, Parsons J, Ellison S, Simon PW. A gene-derived SNP-based high resolution linkage map of carrot including the location of QTL conditioning root and leaf anthocyanin pigmentation.. BMC genomics. 2014 Dec 16; 15:1118.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006208 K3652, is adjacent to primer, K3652_X.
The genetic_marker, MK006208 K3652, is adjacent to primer, K3652_Y.
The genetic_marker, MK006208 K3652, is adjacent to primer, K3652_Common.
The genetic_marker, MK006208 K3652, is located in gene, DCAR_029913.
The genetic_marker, MK006208 K3652, is located in gene, LOC108202804.
The marker_locus, K3652, is an instance of genetic_marker, MK006208 K3652.
Loading content
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2014 70349Chromosome_933.184K3652MapViewer
2016 Integ NG full mapCH927.819K3652MapViewer
2016 70796 NG full mapChr930.602K3652MapViewer
Synonyms: 
  • MK006208
Sequence Coordinates: 
DCARv2_Chr9:17627444..17627491-
View location in JBrowse: 
Sequence: 
CGTGTCACGTCTGAGTTCGACAGTGAGAGCTGCTCCTWCTTTCACAAGAT
TTCCTGCAAATTCATGGACAA
Sequences: 
>MK006208_K3652 ID=MK006208_K3652; Name=MK006208 K3652; organism=Daucus carota; type=genetic_marker
CGTGTCACGTCTGAGTTCGACAGTGAGAGCTGCTCCTWCTTTCACAAGAT
TTCCTGCAAATTCATGGACAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGTGTCACGTCTGAGTTCGACAGTGAGAGCTGCTCCT
Three Prime Flanking Region: 
CTTTCACAAGATTTCCTGCAAATTCATGGACAA
SNP: 
A/T