MK002784 K0228

Resource Type: 
Genetic Marker
Name: 
MK002784 K0228
Identifier: 
MK002784_K0228
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK002784 K0228, is adjacent to primer, K0228_X.
The genetic_marker, MK002784 K0228, is adjacent to primer, K0228_Y.
The genetic_marker, MK002784 K0228, is adjacent to primer, K0228_Common.
The genetic_marker, MK002784 K0228, is located in gene, DCAR_027767.
The genetic_marker, MK002784 K0228, is located in gene, LOC108200001.
The marker_locus, K0228, is an instance of genetic_marker, MK002784 K0228.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH848.147K0228MapViewer
2016 70796 NG full mapChr818.347K0228MapViewer
Synonyms: 
  • MK002784
Sequence Coordinates: 
DCARv2_Chr8:19582014..19582057-
View location in JBrowse: 
DCARv2_Chr8:19582014..19582057-
Sequence: 
TTCGAGTTTTTCACKGGAGGKTGCGGAGCAGCCACAAWTTTCACCAGTTC
TGTTGTATCTTGTGACCCAGT
Sequences: 
>MK002784_K0228 ID=MK002784_K0228; Name=MK002784 K0228; organism=Daucus carota; type=genetic_marker
TTCGAGTTTTTCACKGGAGGKTGCGGAGCAGCCACAAWTTTCACCAGTTC
TGTTGTATCTTGTGACCCAGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTCGAGTTTTTCACKGGAGGKTGCGGAGCAGCCACAA
Three Prime Flanking Region: 
TTTCACCAGTTCTGTTGTATCTTGTGACCCAGT
SNP: 
A/T