MK003436 K0880

Resource Type: 
Genetic Marker
Name: 
MK003436 K0880
Identifier: 
MK003436_K0880
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK003436 K0880, is adjacent to primer, K0880_X.
The genetic_marker, MK003436 K0880, is adjacent to primer, K0880_Y.
The genetic_marker, MK003436 K0880, is adjacent to primer, K0880_Common.
The genetic_marker, MK003436 K0880, is located in gene, DCAR_027286.
The genetic_marker, MK003436 K0880, is located in gene, LOC108199355.
The marker_locus, K0880, is an instance of genetic_marker, MK003436 K0880.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr814.899K0880MapViewer
2016 Integ NG full mapCH851.616K0880MapViewer
Synonyms: 
  • MK003436
Sequence Coordinates: 
DCARv2_Chr8:24478524..24478574-
View location in JBrowse: 
DCARv2_Chr8:24478524..24478574-
Sequence: 
GAAGATTTGGGTAAGGCTGAAGATTAGCCTGAGGATTYAGATTAGAATTG
AACTGACCTCCTGCAGAGTTG
Sequences: 
>MK003436_K0880 ID=MK003436_K0880; Name=MK003436 K0880; organism=Daucus carota; type=genetic_marker
GAAGATTTGGGTAAGGCTGAAGATTAGCCTGAGGATTYAGATTAGAATTG
AACTGACCTCCTGCAGAGTTG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GAAGATTTGGGTAAGGCTGAAGATTAGCCTGAGGATT
Three Prime Flanking Region: 
AGATTAGAATTGAACTGACCTCCTGCAGAGTTG
SNP: 
C/T