MK004403 K1847

Resource Type: 
Genetic Marker
Name: 
MK004403 K1847
Identifier: 
MK004403_K1847
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004403 K1847, is adjacent to primer, K1847_X.
The genetic_marker, MK004403 K1847, is adjacent to primer, K1847_Y.
The genetic_marker, MK004403 K1847, is adjacent to primer, K1847_Common.
The genetic_marker, MK004403 K1847, is located in gene, DCAR_031174.
The genetic_marker, MK004403 K1847, is located in gene, LOC108202647.
The marker_locus, K1847, is an instance of genetic_marker, MK004403 K1847.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr958.008K1847MapViewer
2016 Integ NG full mapCH952.93K1847MapViewer
2016 Integ NG bin mapCH955.608K1847MapViewer
2016 70796 NG full mapChr958.008K1847MapViewer
Synonyms: 
  • MK004403
Sequence Coordinates: 
DCARv2_Chr9:33299991..33300041+
View location in JBrowse: 
Sequence: 
CTAATGTAGTTGCAGAAAATGATGATCTAGTAACCAAYGGGAAACTCAAG
CCAGGAACTTATTCAGTTGAG
Sequences: 
>MK004403_K1847 ID=MK004403_K1847; Name=MK004403 K1847; organism=Daucus carota; type=genetic_marker
CTAATGTAGTTGCAGAAAATGATGATCTAGTAACCAAYGGGAAACTCAAG
CCAGGAACTTATTCAGTTGAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTAATGTAGTTGCAGAAAATGATGATCTAGTAACCAA
Three Prime Flanking Region: 
GGGAAACTCAAGCCAGGAACTTATTCAGTTGAG
SNP: 
C/T