MK004418 K1862

Resource Type: 
Genetic Marker
Name: 
MK004418 K1862
Identifier: 
MK004418_K1862
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004418 K1862, is adjacent to primer, K1862_X.
The genetic_marker, MK004418 K1862, is adjacent to primer, K1862_Y.
The genetic_marker, MK004418 K1862, is adjacent to primer, K1862_Common.
The genetic_marker, MK004418 K1862, is adjacent to gene, DCAR_022673.
The genetic_marker, MK004418 K1862, is located in gene, LOC108227796.
The marker_locus, K1862, is an instance of genetic_marker, MK004418 K1862.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr640.311K1862MapViewer
2016 70796 NG full mapChr640.311K1862MapViewer
2016 Integ NG bin mapCH642.603K1862MapViewer
2016 Integ NG full mapCH646.084K1862MapViewer
Synonyms: 
  • MK004418
Sequence Coordinates: 
DCARv2_Chr6:8697164..8697222-
View location in JBrowse: 
DCARv2_Chr6:8697164..8697222-
Sequence: 
ATWKAACTTGCCTTCCTCCCTTGCCTTGTGGCTCCACSAAATATAAGATT
GTACAGTGCATCTAGGATCTT
Sequences: 
>MK004418_K1862 ID=MK004418_K1862; Name=MK004418 K1862; organism=Daucus carota; type=genetic_marker
ATWKAACTTGCCTTCCTCCCTTGCCTTGTGGCTCCACSAAATATAAGATT
GTACAGTGCATCTAGGATCTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATWKAACTTGCCTTCCTCCCTTGCCTTGTGGCTCCAC
Three Prime Flanking Region: 
AAATATAAGATTGTACAGTGCATCTAGGATCTT
SNP: 
C/G