MK004744 K2188

Resource Type: 
Genetic Marker
Name: 
MK004744 K2188
Identifier: 
MK004744_K2188
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004744 K2188, is adjacent to primer, K2188_X.
The genetic_marker, MK004744 K2188, is adjacent to primer, K2188_Y.
The genetic_marker, MK004744 K2188, is adjacent to primer, K2188_Common.
The genetic_marker, MK004744 K2188, is located in gene, DCAR_016658.
The genetic_marker, MK004744 K2188, is located in gene, LOC108222772.
The marker_locus, K2188, is an instance of genetic_marker, MK004744 K2188.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH517.231K2188MapViewer
2016 80592 NG full mapChr510.056K2188MapViewer
2016 70796 NG full mapChr559.103K2188MapViewer
Synonyms: 
  • MK004744
Sequence Coordinates: 
DCARv2_Chr5:5821188..5821252+
View location in JBrowse: 
DCARv2_Chr5:5821188..5821252+
Sequence: 
AATTTATTTCCCCTCTCTGCAGAATTTTTTGAAAGCAMGTCACTCTTTCG
AGGTTTTACTTTTTTRAGAGA
Sequences: 
>MK004744_K2188 ID=MK004744_K2188; Name=MK004744 K2188; organism=Daucus carota; type=genetic_marker
AATTTATTTCCCCTCTCTGCAGAATTTTTTGAAAGCAMGTCACTCTTTCG
AGGTTTTACTTTTTTRAGAGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AATTTATTTCCCCTCTCTGCAGAATTTTTTGAAAGCA
Three Prime Flanking Region: 
GTCACTCTTTCGAGGTTTTACTTTTTTRAGAGA
SNP: 
A/C