MK004979 K2423

Resource Type: 
Genetic Marker
Name: 
MK004979 K2423
Identifier: 
MK004979_K2423
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004979 K2423, is adjacent to primer, K2423_X.
The genetic_marker, MK004979 K2423, is adjacent to primer, K2423_Y.
The genetic_marker, MK004979 K2423, is adjacent to primer, K2423_Common.
The genetic_marker, MK004979 K2423, is located in gene, DCAR_029365.
The genetic_marker, MK004979 K2423, is located in gene, LOC108202971.
The marker_locus, K2423, is an instance of genetic_marker, MK004979 K2423.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr911.985K2423MapViewer
2016 Integ NG full mapCH910.787K2423MapViewer
Synonyms: 
  • MK004979
Sequence Coordinates: 
DCARv2_Chr9:5428015..5428062-
View location in JBrowse: 
DCARv2_Chr9:5428015..5428062-
Sequence: 
CATCACCAGCAGCTGCTTGCAGATCCAGCATAATCTGRTTGTTTTCTGGA
TCTATTTGTGCAGCCAACTGC
Sequences: 
>MK004979_K2423 ID=MK004979_K2423; Name=MK004979 K2423; organism=Daucus carota; type=genetic_marker
CATCACCAGCAGCTGCTTGCAGATCCAGCATAATCTGRTTGTTTTCTGGA
TCTATTTGTGCAGCCAACTGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CATCACCAGCAGCTGCTTGCAGATCCAGCATAATCTG
Three Prime Flanking Region: 
TTGTTTTCTGGATCTATTTGTGCAGCCAACTGC
SNP: 
A/G