MK005095 K2539

Resource Type: 
Genetic Marker
Name: 
MK005095 K2539
Identifier: 
MK005095_K2539
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005095 K2539, is adjacent to primer, K2539_X.
The genetic_marker, MK005095 K2539, is adjacent to primer, K2539_Y.
The genetic_marker, MK005095 K2539, is adjacent to primer, K2539_Common.
The genetic_marker, MK005095 K2539, is located in gene, DCAR_022381.
The genetic_marker, MK005095 K2539, is located in gene, LOC108227933.
The marker_locus, K2539, is an instance of genetic_marker, MK005095 K2539.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH651.684K2539MapViewer
2016 70796 NG full mapChr646.156K2539MapViewer
Synonyms: 
  • MK005095
Sequence Coordinates: 
DCARv2_Chr6:13166903..13166955+
View location in JBrowse: 
DCARv2_Chr6:13166903..13166955+
Sequence: 
TGAAGAACCACCTATGGGTTTTTGTTAATGCACTAATYGATAATCCTGCT
TTTGATTCCCAAACTAAGGAG
Sequences: 
>MK005095_K2539 ID=MK005095_K2539; Name=MK005095 K2539; organism=Daucus carota; type=genetic_marker
TGAAGAACCACCTATGGGTTTTTGTTAATGCACTAATYGATAATCCTGCT
TTTGATTCCCAAACTAAGGAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGAAGAACCACCTATGGGTTTTTGTTAATGCACTAAT
Three Prime Flanking Region: 
GATAATCCTGCTTTTGATTCCCAAACTAAGGAG
SNP: 
C/T