MK005216 K2660

Resource Type: 
Genetic Marker
Name: 
MK005216 K2660
Identifier: 
MK005216_K2660
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005216 K2660, is adjacent to primer, K2660_X.
The genetic_marker, MK005216 K2660, is adjacent to primer, K2660_Y.
The genetic_marker, MK005216 K2660, is adjacent to primer, K2660_Common.
The genetic_marker, MK005216 K2660, is located in gene, DCAR_022553.
The genetic_marker, MK005216 K2660, is located in gene, LOC108227454.
The marker_locus, K2660, is an instance of genetic_marker, MK005216 K2660.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr645.414K2660MapViewer
2016 Integ NG full mapCH650.942K2660MapViewer
Synonyms: 
  • MK005216
Sequence Coordinates: 
DCARv2_Chr6:10424727..10424782+
View location in JBrowse: 
DCARv2_Chr6:10424727..10424782+
Sequence: 
ATCAACAACTATAGCCTTGGCGACTTCAGCAGACTCCSTCGGCCCTTCGA
GGATTACTTCATCATGAACCT
Sequences: 
>MK005216_K2660 ID=MK005216_K2660; Name=MK005216 K2660; organism=Daucus carota; type=genetic_marker
ATCAACAACTATAGCCTTGGCGACTTCAGCAGACTCCSTCGGCCCTTCGA
GGATTACTTCATCATGAACCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATCAACAACTATAGCCTTGGCGACTTCAGCAGACTCC
Three Prime Flanking Region: 
TCGGCCCTTCGAGGATTACTTCATCATGAACCT
SNP: 
C/G