MK005485 K2929

Resource Type: 
Genetic Marker
Name: 
MK005485 K2929
Identifier: 
MK005485_K2929
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005485 K2929, is adjacent to primer, K2929_X.
The genetic_marker, MK005485 K2929, is adjacent to primer, K2929_Y.
The genetic_marker, MK005485 K2929, is adjacent to primer, K2929_Common.
The genetic_marker, MK005485 K2929, is located in gene, DCAR_019216.
The genetic_marker, MK005485 K2929, is located in gene, LOC108223100.
The marker_locus, K2929, is an instance of genetic_marker, MK005485 K2929.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH556.909K2929MapViewer
2016 Integ NG bin mapCH556.832K2929MapViewer
2016 70796 NG full mapChr510.451K2929MapViewer
2016 70796 NG bin mapChr510.451K2929MapViewer
Synonyms: 
  • MK005485
Sequence Coordinates: 
DCARv2_Chr5:37158486..37158532+
View location in JBrowse: 
DCARv2_Chr5:37158486..37158532+
Sequence: 
AGTGTCGGAGTCTGGGAAGGAACCAAATAGTGAAATTKCTAGGCGTGGTG
CCATCAATGTTCATGATGTGT
Sequences: 
>MK005485_K2929 ID=MK005485_K2929; Name=MK005485 K2929; organism=Daucus carota; type=genetic_marker
AGTGTCGGAGTCTGGGAAGGAACCAAATAGTGAAATTKCTAGGCGTGGTG
CCATCAATGTTCATGATGTGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGTGTCGGAGTCTGGGAAGGAACCAAATAGTGAAATT
Three Prime Flanking Region: 
CTAGGCGTGGTGCCATCAATGTTCATGATGTGT
SNP: 
G/T