MK005886 K3330

Resource Type: 
Genetic Marker
Name: 
MK005886 K3330
Identifier: 
MK005886_K3330
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005886 K3330, is adjacent to primer, K3330_X.
The genetic_marker, MK005886 K3330, is adjacent to primer, K3330_Y.
The genetic_marker, MK005886 K3330, is adjacent to primer, K3330_Common.
The genetic_marker, MK005886 K3330, is located in gene, DCAR_002964.
The genetic_marker, MK005886 K3330, is located in gene, LOC108204934.
The marker_locus, K3330, is an instance of genetic_marker, MK005886 K3330.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr127.147K3330MapViewer
2016 Integ NG full mapCH148.392K3330MapViewer
Synonyms: 
  • MK005886
Sequence Coordinates: 
DCARv2_Chr1:34421571..34421624-
View location in JBrowse: 
DCARv2_Chr1:34421571..34421624-
Sequence: 
GTGGAAAATATGGTGTGAATTTTTGGATGTGGCCTCCSAGGTTCATCAAA
AACCTGATTTTGGAMCTTAAC
Sequences: 
>MK005886_K3330 ID=MK005886_K3330; Name=MK005886 K3330; organism=Daucus carota; type=genetic_marker
GTGGAAAATATGGTGTGAATTTTTGGATGTGGCCTCCSAGGTTCATCAAA
AACCTGATTTTGGAMCTTAAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTGGAAAATATGGTGTGAATTTTTGGATGTGGCCTCC
Three Prime Flanking Region: 
AGGTTCATCAAAAACCTGATTTTGGAMCTTAAC
SNP: 
C/G