List of all traits in CarrotOmics

Trait NameTrait TypeTrait Definition
Mean absolute decrease in percent seed germination after 18 days due to 150 mM NaCl solution salt stressquantitativeAbsolute Decrease = Percent Germination Control – Percent Germination NaCl stress;
Mean absolute decrease in percent seed germination after 18 days due to 35 ºC heat stressquantitativeAbsolute Decrease = Percent Germination Control – Percent Germination Heat stress;
Mean drought tolerance index (DTI) for percent seed germination after 10 days due to -0.58 MPa PEG-6000 solution drought stressquantitativeDrought Tolerance Index = (Percent Germination PEG-6000 drought stress × Percent Germination Control)/(Percent Germination Control Average)²
Mean heat tolerance index (HTI) for percent seed germination after 18 days due to 35 ºC heat stressquantitativeSalt Tolerance Index = (Percent Germination Heat stress × Percent Germination Control)/(Percent Germination Control Average)²
Mean inhibition index for percent seed germination after 18 days due to 150 mM NaCl solution salt stressquantitativeInhibition Index = 100% * (Percent Germination Control – Percent Germination NaCl stress)/(Percent Germination Control)
Mean inhibition index for percent seed germination after 18 days due to 35 ºC heat stressquantitativeInhibition Index = 100% * (Percent Germination Control – Percent Germination Heat stress)/(Percent Germination Control)
Mean inhibition index (II) for percent seed germination after 10 days due to -0.58 MPa PEG-6000 solution drought stressquantitativeInhibition Index = 100% * (Percent Germination Control – Percent Germination PEG-6000 drought stress)/(Percent Germination Control)
Mean percent seed germination after 10 days with -0.58 MPa PEG-6000 solution drought stressquantitativeMean percent seed germination after 10 days with -0.58 MPa PEG-6000 solution drought stress (180 g/L)
Mean percent seed germination after 10 days without abiotic stressquantitativeMean percent seed germination after 10 days without abiotic stress
Mean percent seed germination after 18 days with 150 mM NaCl solution salt stressquantitativeMean percent seed germination after 18 days with 150 mM NaCl solution salt stress
Mean percent seed germination after 18 days with 35 ºC heat stressquantitativeMean percent seed germination after 18 days with 35 ºC heat stress
Mean percent seed germination after 18 days without abiotic stressquantitativeMean percent seed germination after 18 days without abiotic stress
Mean salt tolerance index (STI) for percent seed germination after 18 days due to 150 mM NaCl solution salt stressquantitativeSalt Tolerance Index = (Percent Germination NaCl stress × Percent Germination Control)/(Percent Germination Control Average)²
Meloidogyne incognita resistanceQTLCausal agent: Meloidogyne incognita. Symptom: resistant to damage caused by the pathogen Meloidogyne incognita (root knot nematode). It produces characteristic galls (swellings) on roots. [Gramene:pankaj_jaiswal]
Meloidogyne javanica resistanceMTLCausal agent: Meloidogyne javanica. Symptom: resistant to damage caused by the pathogen Meloidogyne javanica (root knot nematode). It produces characteristic galls (swellings) on roots. [Gramene:pankaj_jaiswal]
OCIM.rootQTLContent of ocimene in root tissue
Orange rootQTLVisible presence of α-carotene or β-carotene pigmentation in the storage root
P1MTLP1/- Purple root; p1/p1 Non-purple root
P3MTLP3/- Anthocyanin pigmentation in both roots and petioles; p3/p3 pigmentation absent
Percent Emergence 20 DASquantitativeA transformation of stand_count_20_DAS, calculated from the observed stand count divided by the expected number of plants, measured 20 days after sowing