MK005496 K2940

Resource Type: 
Genetic Marker
Name: 
MK005496 K2940
Identifier: 
MK005496_K2940
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005496 K2940, is adjacent to primer, K2940_X.
The genetic_marker, MK005496 K2940, is adjacent to primer, K2940_Y.
The genetic_marker, MK005496 K2940, is adjacent to primer, K2940_Common.
The genetic_marker, MK005496 K2940, is located in gene, DCAR_018601.
The genetic_marker, MK005496 K2940, is located in gene, LOC108223096.
The marker_locus, K2940, is an instance of genetic_marker, MK005496 K2940.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr537.192K2940MapViewer
2016 Integ NG full mapCH549.924K2940MapViewer
2016 70796 NG full mapChr517.976K2940MapViewer
Synonyms: 
  • MK005496
Sequence Coordinates: 
DCARv2_Chr5:31436727..31436783-
View location in JBrowse: 
DCARv2_Chr5:31436727..31436783-
Sequence: 
AGAAGCTCTCAGAAGAAGGTGCCTGTTGATGATTATCRTGAATCTCATCA
AACCTTATTTGAAATGCCTGC
Sequences: 
>MK005496_K2940 ID=MK005496_K2940; Name=MK005496 K2940; organism=Daucus carota; type=genetic_marker
AGAAGCTCTCAGAAGAAGGTGCCTGTTGATGATTATCRTGAATCTCATCA
AACCTTATTTGAAATGCCTGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGAAGCTCTCAGAAGAAGGTGCCTGTTGATGATTATC
Three Prime Flanking Region: 
TGAATCTCATCAAACCTTATTTGAAATGCCTGC
SNP: 
A/G